Publications

    • Shnerb, N.M.; Louzoun, Y.; Bettelheim, E.; Solomon, S.; (2000) The importance of being discrete: Life always wins on the surface, Proceedings of the National Academy of Sciences 97(19):10322
    • Louzoun, Y.; Solomon, S.; Atlan, H.; Cohen, I.R.; (2000) The emergence of spatial complexity in the immune system, Arxiv preprint cond-mat/0008133
    • Louzoun, Y.; Cohen, I.; Atlan, H.; (2000) Destruction of CD4 T lymphocytes alone cannot account for their long-term decrease in AIDS, Arxiv preprint math/0008052
    • Louzoun, Y.; Solomon, S.; Atlan, H.; Cohen, I.; (2000) Microscopic Discrete Proliferating Components Cause the Self-Organized Emergence of Macroscopic Adaptive Features in Biological Systems, Arxiv preprint nlin/0006043
    • Hershberg, U.; Louzoun, Y.; Atlan, H.; Solomon, S.; (2000) HIV time hierarchy: winning the war while, loosing all the battles Physica A: Statistical Mechanics and its Applications 289(1):178-190

    • Louzoun, Y.; Solomon, S.; Atlan, H.; Cohen, I.R.; (2001) Modeling complexity in biology, Physica A: Statistical Mechanics and its Applications 297(1):242-252
    • Shnerb, NM; Bettelheim, E.; Louzoun, Y.; Agam, O.; Solomon, S.; (2001) Adaptation of autocatalytic fluctuations to diffusive noise, Physical Review E 63(2):21103
    • Louzoun, Y.; Solomon, S.; (2001) Volatility driven market in a generalized Lotka-Voltera formalism, Physica A: Statistical Mechanics and its Applications 302(1):220-233
    • Louzoun, Y.; Atlan, H.; Cohen, I.R.; (2001) Modeling the Influence of TH1-and TH2-type Cells in Autoimmune Diseases, Journal of autoimmunity 17(4):311-321

    • Louzoun, Y.; Friedman, T.; Luning Prak, E.; Litwin, S.; Weigert, M.; (2002) Analysis of B cell receptor production and rearrangement* 1:: Part I. Light chain rearrangement, Seminars in Immunology 14(3):169-190
    • Louzoun, Y.; Luning Prak, E.; Friedman, T.; Litwin, S.; Weigert, M.; (2002) Comment on Langman and Cohn, Seminars in Immunology 14(3):231-232
    • Louzoun, Y.; Luning, P.E.; Litwin, S.; Weigert, M.; (2002) D is for different-differences between H and L chain rearrangement., Seminars in immunology 14(3):239
    • Louzoun, Y.; Solomon, S.; (2002) Power Law Volatility Auto-Correlations in Stochastic Logistic Systems, Computing in Economics and Finance

    • Bhanot, G.; Louzoun, Y.; Zhu, J.; DeLisi, C.; (2003) The importance of thermodynamic equilibrium for high throughput gene expression arrays, Biophysical journal 84(1):124-135
    • Kleinstein, S.H.; Louzoun, Y.; Shlomchik, M.J.; (2003) Estimating hypermutation rates from clonal tree data, The Journal of Immunology 171(9):4639
    • Louzoun, Y.; Solomon, S.; Atlan, H.; Cohen, I.R.; (2003) Proliferation and competition in discrete biological systems, Bulletin of mathematical biology 65(3):375-396
    • Louzoun, Y.; Weigert, M.; Bhanot, G.; (2003) Dynamical analysis of a degenerate primary and secondary humoral immune response, Bulletin of mathematical biology 65(3):535-545
    • Bonne, O.; Gilboa, A.; Louzoun, Y.; Brandes, D.; Yona, I.; Lester, H.; Barkai, G.; Freedman, N.; Chisin, R.; Shalev, A.Y.; (2003) Resting regional cerebral perfusion in recent posttraumatic stress disorder, Biological Psychiatry 54(10):1077-1086
    • Bonne, O.; Gilboa, A.; Louzoun, Y.; Kempf-Sherf, O.; Katz, M.; Fishman, Y.; Ben-Nahum, Z.; Krausz, Y.; Bocher, M.; Lester, H.; (2003) Cerebral blood flow in chronic symptomatic mild traumatic brain injury, Psychiatry Research: Neuroimaging 124(3):141-152
    • Bonne, O.; Louzoun, Y.; Aharon, I.; Krausz, Y.; Karger, H.; Lerer, B.; Bocher, M.; Freedman, N.; Chisin, R.; (2003) Cerebral blood flow in depressed patients: a methodological comparison of statistical parametric mapping and region of interest analyses, Psychiatry Research: Neuroimaging 122(1):49-57

    • Li, Y.; Louzoun, Y.; Weigert, M.; (2004) Editing anti-DNA B cells by Vλx, The Journal of experimental medicine 199(3):337
    • Louzoun, Y.; Vider, T.; (2004) Score for proteasomal peptide production probability, Immunology 1:45-50
    • Goldenberg, J.; Libai, B.; Louzoun, Y.; Mazursky, D.; Solomon, S.; (2004) Inevitably reborn: the reawakening of extinct innovations, Technological Forecasting and Social Change 71(9):881-896
    • Nudelman, G.; Louzoun, Y.; (2004) The role of lipid rafts in cell surface BCR antigen binding dynamics, Engineering in Medicine and Biology Society, 2004. IEMBS ’04. 26th Annual International Conference of the IEEE (1):667-670
    • Gilboa, A.; Shalev, A.Y.; Laor, L.; Lester, H.; Louzoun, Y.; Chisin, R.; Bonne, O.; (2004) Functional connectivity of the prefrontal cortex and the amygdala in posttraumatic stress disorder, Biological psychiatry 55(3):263-272
    • Louzoun, Y.; Solomon, S.; Goldenberg, J.; Mazursky, D.; The Risk at Being Unfair

  • Louzoun, Y.; Friedman, T.; Luning Prak, E.; Litwin, S.; Weigert, M.; (2005) Analysis of B cell receptor production and rearrangement, Seminars in Immunology 14(3):169-190
    • Louzoun, Y.; Vider, T.; Weigert, M.; (2006) T–Cell epitope repertoire as predicted from human and viral genomes, Molecular immunology 43(6):559-569
    • Louzoun, Y.; Muchnik, L.; Solomon, S.; (2006) Copying nodes versus editing links: the source of the difference between genetic regulatory networks and the WWW, Bioinformatics 22(5):581-588
    • Nudelman, G.; Louzoun, Y.; (2006) Cell surface dynamics: the balance between diffusion, aggregation and endocytosis, IEE Proceedings-Systems Biology 153(1):34-42
    • Muchnik, L.; Louzoun, Y.; Solomon, S.; (2006) Agent Based Simulation Design Principles—Applications to Stock Market, Practical Fruits of Econophysics :183-188
    • Agranovich, A.; Louzoun, Y.; Shnerb, N.; Moalem, S.; (2006) Catalyst-induced growth with limited catalyst lifespan and competition, Journal of theoretical biology 241(2):307-320
    • Magori-Cohen, R.; Louzoun, Y.; Kleinstein, S.H.; (2006) Mutation parameters from DNA sequence data using graph theoretic measures on lineage trees, Bioinformatics 22(14):e332-e340
    • Louzoun, Y.; Muchnick&, L.; Solomon, S.; (2006) Copying nodes vs. Editing links: the source of the difference between genetic networks and the WWW, Bioinformatics 22(5):581-588

    • Muchnik, L.; Itzhack, R.; Solomon, S.; Louzoun, Y.; (2007) Self-emergence of knowledge trees: Extraction of the Wikipedia hierarchies, Physical Review E 76(1):16106
    • Louzoun, Y.; (2007) The evolution of mathematical immunology, Immunological reviews 216(1):9-20
    • Vider–Shalit, T.; Raffaeli, S.; Louzoun, Y.; (2007) Virus-epitope vaccine design: informatic matching the HLA-I polymorphism to the virus genome, Molecular immunology 44(6):1253-1261
    • Vider–Shalit, T.; Fishbain, V.; Raffaeli, S.; Louzoun, Y.; (2007) Phase-dependent immune evasion of herpesviruses, Journal of virology 81(17):9536-9545
    • Louzoun, Y.; Atlan, H.; (2007) The emergence of goals in a self-organizing network: A non-mentalist model of intentional actions, Neural networks 20(2):156-171
    • Itzhack, R.; Mogilevski, Y.; Louzoun, Y.; (2007) An optimal algorithm for counting network motifs, Physica A: Statistical Mechanics and its Applications 381:482-490
    • Louzoun, Y.; Shnerb, N.M.; Solomon, S.; (2007) Microscopic noise, adaptation and survival in hostile environments” The European Physical Journal B-Condensed Matter and Complex Systems 56(2):141-148

    • Ginodi, I.; Vider–Shalit, T.; Tsaban, L.; Louzoun, Y.; (2008) Precise score for the prediction of peptides cleaved by the proteasome, Bioinformatics 24(4):477-483
    • Lavi, O.; Louzoun, Y.; Klement, E.; (2008) Listeriosis: a model for the fine balance between immunity and morbidity, Epidemiology 19(4):581

    • Anderson, S.M.; Khalil, A.; Uduman, M.; Hershberg, U.; Louzoun, Y.; Haberman, A.M.; Kleinstein, S.H.; Shlomchik, M.J.; (2009) Taking advantage: high-affinity B cells in the germinal center have lower death rates, but similar rates of division compared to low-affinity cells The Journal of Immunology 183(11)7314-7325
    • Merbl, Y.; Itzchak, R.; Vider–Shalit, T.; Louzoun, Y.; Quintana, F.J.; Vadai, E.; Eisenbach, L.; Cohen, I.R.; (2009) A systems immunology approach to the host-tumor interaction: large-scale patterns of natural autoantibodies distinguish healthy and tumor-bearing mice, PloS one 4(6):e6053
    • Vider–Shalit, T.; Almani, M.; Sarid, R.; Louzoun, Y.; (2009) The HIV hide and seek game: an immunogenomic analysis of the HIV epitope repertoire, Aids 23(11):1311
    • Vider–Shalit, T.; Sarid, R.; Maman, K.; Tsaban, L.; Levi, R.; Louzoun, Y.; (2009) Viruses selectively mutate their CD8+ T–Cell epitopes—a large-scale immunomic analysis, Bioinformatics 25(12):i39-i44
    • Nudelman, G.; Weigert, M.; Louzoun, Y.; (2009) In-silico cell surface modeling reveals mechanism for initial steps of B-cell receptor signal transduction, Molecular immunology 46(15):3141-3150
    • Almani, M.; Raffaeli, S.; Vider–Shalit, T.; Tsaban, L.; Fishbain, V.; Louzoun, Y.; (2009) Human self–protein CD8+ T–cell epitopes are both positively and negatively selected, European journal of immunology 39(4):1056-1065
    • Lavi, O.; Louzoun, Y.; (2009) What cycles the cell?—Robust autonomous cell cycle models, Mathematical Medicine and Biology 26(4):337-359

    • Itzhack, R.; Louzoun, Y.; (2010) Random distance dependent attachment as a model for neural network generation in the Caenorhabditis elegans, Bioinformatics 26(5):647-652
    • Vider–Shalit, T.; Louzoun, Y.; (2010) MHC-I prediction using a combination of T cell epitopes and MHC-I binding peptides, Journal of immunological methods
    • Itzhack, R.; Muchnik, L.; Erez, T.; Tsaban, L.; Goldenberg, J.; Solomon, S.; Louzoun, Y.; (2010) Empirical extraction of mechanisms underlying real world network generation, Physica A: Statistical Mechanics and its Applications 389(22):5308-5318
    • Louzoun, Y.; Vider–Shalit, T.; (2010) PP-026-09 Viruses selectively mutate cd8+ T cell epitopes in proteins expressed in the early stages of the viral life cycle, International Immunology Meeting Abstracts 22(Suppl 1 Pt 2):ii49-ii56
    • Atlan, H.; Louzoun, Y.; (2010) Emergence of Intentional Procedures in Self-Organizing Neural Networks, Causality Meaningful Complexity and Embodied Cognition, 46(1):47-56

    • Maman, Y.; Blancher, A.; Benichou, J.; Yablonka, A.; Efroni, S.; Louzoun, Y.; (2011) Immune-induced evolutionary selection focused on a single reading frame in overlapping hepatitis B virus proteins, Journal of virology 85(9):4558-4566
    • Kovjazin, R.; Volovitz, I.; Daon, Y.; Vider–Shalit, T.; Azran, R.; Tsaban, L.; Carmon, L.; Louzoun, Y.; (2011) Signal peptides and trans-membrane regions are broadly immunogenic and have high CD8+ T cell epitope densities: Implications for vaccine development, Molecular Immunology
    • Toussaint, N.C.; Maman, Y.; Kohlbacher, O.; Louzoun, Y.; (2011) Universal peptide vaccines-Optimal peptide vaccine design based on viral sequence conservation, Vaccine
    • Sekiguchi, D.R.; Smith, S.B.; Sutter, J.A.; Goodman, N.G.; Propert, K.; Louzoun, Y.; Rogers, W.; Luning Prak, E.T.; (2011) Circulating lymphocyte subsets in normal adults are variable and can be clustered into subgroups, Cytometry Part B: Clinical Cytometry
    • Maman, Y.; Nir-Paz, R.; Louzoun, Y.; (2011) Bacteria Modulate the CD8+ T Cell Epitope Repertoire of Host Cytosol-Exposed Proteins to Manipulate the Host Immune Response, PLoS computational biology 7(10):e1002220
    • Feldman, R.; Magori-Cohen, R.; Galili, G.; Singer, M.; Louzoun, Y.; (2011) Mother and infant coordinate heart rhythms through episodes of interaction synchrony, Infant Behavior and Development
    • Liberman, G.; Louzoun, Y.; Colliot, O.; Ben Bashat, D.; (2011) T1 mapping, AIF and pharmacokinetic parameter extraction from dynamic contrast enhancement MRI data, Multimodal Brain Image Analysis 76-83
    • Lavi, O.; Ginsberg, D.; Louzoun, Y.; (2011) Regulation of modular Cyclin and CDK feedback loops by an E2F transcription oscillator in the mammalian cell cycle, Mathematical Biosciences and Engineering (MBE) 8(2):445-461
    • Agranovich, A.; Vider–Shalit, T.; Louzoun, Y.; (2011) Optimal viral immune surveillance evasion strategies, Theoretical Population Biology
    • Weisman, O.; Magori-Cohen, R.; Louzoun, Y.; Eidelman, A.I.; Feldman, R.; (2011) Sleep-Wake Transitions in Premature Neonates Predict Early Development, Pediatrics 128(4):706-714
    • Cohen, R.M.; Kleinstein, S.H.; Louzoun, Y.; (2011) Somatic hypermutation targeting is influenced by location within the immunoglobulin V region., Molecular immunology
    • Lavi, O.; Klement, E.; Louzoun, Y.; (2011) Effect of Vaccination in Environmentally Induced Diseases, Bulletin of mathematical biology 73(5):1101-1117

    • Maman, Y., A. Agranovich, T.V. Shalit, and Y. Louzoun, Evolutionary Principles in Viral Epitopes. Mathematical Methods and Models in Biomedicine, 2012: p. 59-83.
    • Magori-Cohen, R., Y. Louzoun, Y. Herziger, E. Oron, A. Arazi, E. Tuppurainen, N. Shpigel, and E. Klement, Mathematical modelling and evaluation of the different routes of transmission of lumpy skin disease virus. Veterinary Research, 2012. 43(1): p. 1.
    • Louzoun, Y. and V.V. Ganusov, Evolution of viral life-cycle in response to cytotoxic T lymphocyte-mediated immunity. J Theor Biol, 2012. 310: p. 3-13.
    • Brot, H., L. Muchnik, J. Goldenberg, and Y. Louzoun, Feedback between node and network dynamics can produce real world network properties. Physica A: Statistical Mechanics and its Applications, 2012.
    • Benichou, J., R. Ben-Hamo, Y. Louzoun, and S. Efroni, Rep-Seq: uncovering the immunological repertoire through next-generation sequencing. Immunology, 2012. 135(3): p. 183-91.
    • Behar, H., N. Shnerb, and Y. Louzoun, Balance between absorbing and positive fixed points in resource consumption models. , Physical Review E, 2012. 86(3): p. 031146.
    • Barkay, G., N. Freedman, H. Lester, Y. Louzoun, D. Sapoznikov, D. Luckenbaugh, A.Y. Shalev, R.G. Chisin, and O. Bonne, Brain activation and heart rate during script-driven traumatic imagery in PTSD: Preliminary findings. ,Psychiatry Research: Neuroimaging, 2012.
    • Agranovich, A. and Y. Louzoun, Predator-prey dynamics in a uniform medium lead to directed percolation and wave-train propagation. , Phys Rev E Stat Nonlin Soft Matter Phys, 2012. 85(3 Pt 1):
    • Benichou, J.; Ben–Hamo, R.; Louzoun, Y.; Efroni, S.; (2012) Rep-Seq: uncovering the immunological repertoire through next-generation sequencing, Immunology 135(3):183-191
    • Magori-Cohen, R.; Louzoun, Y.; Herziger, Y.; Oron, E.; Arazi, A.; Tuppurainen, E.; Shpigel, N.Y.; Klement, E.; Sadilkova, L.; Nepereny, J.; (2012) Mathematical modelling and evaluation of the different routes of transmission of lumpy skin disease virus, Mathematical modelling 43:1
    • Agranovich, A.; Louzoun, Y.; (2012) Predator-prey dynamics in a uniform medium lead to directed percolation and wave-train propagation, Physical Review E 85(3):31911
    • Louzoun, Y.; Ganusov, V.V.; (2012) Evolution of viral life-cycle in response to cytotoxic T lymphocyte-mediated immunity, Journal of Theoretical Biology 310:3-13

    • Liberman, G., Louzoun, Y., & Ben Bashat, D. (2013). T1 Mapping using variable flip angle SPGR data with flip angle correction. Journal of Magnetic Resonance Imaging.
    • Brot, H., Honig, M., Muchnik, L., Goldenberg, J., & Louzoun, Y. (2013). Edge removal balances preferential attachment and triad closing. Physical Review E, 88(4), 042815.
    • Agranovich, A., Maman, Y., & Louzoun, Y. (2013). Viral proteome size and CD8+ T cell epitope density are correlated: The effect of complexity on selection. Infection, Genetics and Evolution, 20, 71-77.
    • Behar, H., Agranovich, A., & Louzoun, Y. (2013). Diffusion rate determines balance between extinction and proliferation in birth-death processes. Mathematical biosciences and engineering: MBE, 10(3), 523-550.
    • Davidovich, H. and Y. Louzoun, The balance between adaptation to catalysts and competition radius shapes the total wealth, time variability and inequality. The European Physical Journal B, 2013. 86(5): p. 1-13.
    • Benichou, J., J. Glanville, E.T. Prak, R. Azran, T.C. Kuo, J. Pons, C. Desmarais, L. Tsaban, and Y. Louzoun, The Restricted DH Gene Reading Frame Usage in the Expressed Human Antibody Repertoire Is Selected Based upon its Amino Acid Content. J Immunol, 2013. 190(11): p. 5567-77.
    • Bodaker, M., Y. Louzoun, and E. Mitrani, Mathematical Conditions for Induced Cell Differentiation and Trans-differentiation in Adult Cells. Bull Math Biol, 2013. 75(5): p. 819-44.
    • Hoze, E., L. Tsaban, Y. Maman, and Y. Louzoun, Predictor for the effect of amino acid composition on CD4+ T cell epitopes preprocessing. J Immunol Methods, 2013. 391(1-2): p. 163-73.
    • Maman, Y., A. Agranovich, T.V. Shalit, and Y. Louzoun, Evolutionary Principles in Viral Epitopes, in Mathematical Methods and Models in Biomedicine. 2013, Springer New York. p. 59-83.
    • Liberman, G., T. Vider-Shalit, and Y. Louzoun. Kernel multi label vector optimization (kMLVO)-A unified multi-label classification formalism. in Learning and Intelligent OptimizatioN. 2013.
    • Liberman, G., Y. Louzoun, O. Aizenstein, D.T. Blumenthal, F. Bokstein, M. Palmon, B.W. Corn, and D. Ben Bashat, Automatic multi-modal MR tissue classification for the assessment of response to bevacizumab in patients with glioblastoma. Eur J Radiol, 2013. 82(2): p. e87-94.
    • Itzhack, R., L. Tsaban, and Y. Louzoun, Long loops of information flow in genetic networks highlight an inherent directionality. Systems Biomedicine, 2013. 1(1): p. 35-34.
    • Behar, H., A. Agranovich, and Y. Louzoun, Diffusion rate determines balance between extinction and proliferation in birth-death processes. . Mathematical Biosciences and Engineering (MBE), 2013. 10: p. 523-550.

    • Yoram Louzoun,; Chuan Xue; Gregory B Lesinski,; Avner Friedman,(2014) A mathematical model for pancreatic cancer growth and treatments. Journal of theoretical biology – in press
    • Bodaker, M., Meshorer, E., Mitrani, E., & Louzoun, Y. (2014). Genes related to differentiation are correlated with the gene regulatory network structure. Bioinformatics, 30(3), 406-413.
    • Rosen, Y., & Louzoun, Y. (2014). Directionality of real world networks as predicted by path length in directed and undirected graphs. Physica A: Statistical Mechanics and its Applications.
    • Louzoun, Yoram; Xue, Chuan; Lesinski, Gregory B; Friedman, Avner;      (2014)       A mathematical model for pancreatic cancer growth and treatments        Journal of theoretical biology      351     74-82
    • Salpini, R; Alteri, C; Colagrossi, L; Bellocchi, M-C; Armenia, D; Di Santo, F; Carioti, L; Continenza, F; Bertoli, A; Louzoun, Y;          (2014)     P681 HBsAg MUTATIONS WITH ENHANCED CAPABILITY TO EVADE IMMUNE RESPONSE ARE ASSOCIATED WITH HBV REACTIVATION DURING IMMUNOSUPPRESSION  Journal of Hepatology     1             60           S296
    • Behar, Hilla; Brenner, Naama; Louzoun, Yoram;    Coexistence of productive and non-productive populations by fluctuation-driven spatio-temporal patterns             Theoretical population biology               96                          20-29     2014      Academic Press
    • Slater, Noa; Itzchack, Royi; Louzoun, Yoram;      (2014)     Mid size cliques are more common in real world networks than triangles             Network Science              2             3      387-402

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    • Salpini, Romina; Colagrossi, Luna; Bellocchi, Maria Concetta; Surdo, Matteo; Becker, Christina; Alteri, Claudia; Aragri, Marianna; Ricciardi, Alessandra; Armenia, Daniele; Pollicita, Michela;     (2015) Hepatitis B surface antigen genetic elements critical for immune escape correlate with hepatitis B virus reactivation upon immunosuppression   Hepatology   61     3     823-833
    •  Maman, Yaakov; Hershberg, Uri; Louzoun, Yoram;   (2015)   Viral CD8 T cell epitope nucleotide composition shows evidence of short-and long-term evolutionary strategies       Immunogenetics       67     1     15-24
    • Brot, Hilla; Muchnik, Lev; Louzoun, Yoram;   (2015)   Directed triadic closure and edge deletion mechanism induce asymmetry in directed edge properties       The European Physical Journal B     88     1
    • Behar, Hilla; Louzoun, Yoram;   (2015) Commensal pathogens as a source of a coexistence mechanism       Journal of theoretical biology   370           45-52 2015   Academic Press
    • Slater, Noa; Louzoun, Yoram; Gragert, Loren; Maiers, Martin; Chatterjee, Ansu; Albrecht, Mark;     (2015)   Power Laws for Heavy-Tailed Distributions: Modeling Allele and Haplotype Diversity for the National Marrow Donor Program    Plos. Comp. Bio
    • Rosen, Yonatan; Louzoun, Yoram;     (2015) Topological similarity as a proxy to content similarity       Journal of Complex Networks                 cnv012
    • Mitchell, Rebecca M; Schukken, Ynte; Koets, Ad; Weber, Maarten; Bakker, Douwe; Stabel, Judy; Whitlock, Robert H; Louzoun, Yoram;   (2015) Differences in intermittent and continuous fecal shedding patterns between natural and experimental Mycobacterium avium subspecies paratuberculosis infections in cattle     Veterinary research   46     1
    • Louzoun, Yoram; Mitchell, Rebecca; Behar, Hilla; Schukken, Ynte; (2015)Two state model for a constant disease hazard in paratuberculosis (and other bovine diseases) Vet Res
    • Yaari, Gur; Benichou, Jennifer IC; Vander Heiden, Jason A; Kleinstein, Steven H; Louzoun, Yoram; (2015)       The mutation patterns in B-cell immunoglobulin receptors reflect the influence of selection acting at multiple time-scales Phil. Trans. R. Soc. B   370   1676   20140242
    • Frasch, Martin G; Durosier, Lucien Daniel; Gold, Nathan; Cao, Mingju; Matushewski, Brad; Keenliside, Lynn; Louzoun, Yoram; Ross, Michael G; Richardson, Bryan S; (2015)Adaptive shut‐down of EEG activity predicts critical acidemia in the near‐term ovine fetus Physiological reports   3       7     e12435

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    • “Rosen, Yonatan; Louzoun, Yoram; ” Topological similarity as a proxy to content similarity      Journal of Complex Networks       4          1          38-60   2016    Oxford University Press
    • “Behar, H; Brenner, N; Ariel, G; Louzoun, Y; ” Fluctuations-induced coexistence in public goods dynamics            Physical Biology 13        5          56006  2016    IOP Publishing
    • “Liberman, Gilad; Louzoun, Yoram; Artzi, Moran; Nadav, Guy; Ewing, James R; Bashat, Dafna Ben; ” DUSTER: Dynamic contrast enhance up-sampled temporal resolution analysis method    Magnetic resonance imaging        34        4          442-450           2016    Elsevier
    • “Liberman, Gilad; Benichou, Jennifer IC; Maman, Yaakov; Glanville, Jacob; Alter, Idan; Louzoun, Yoram; ” Estimate of within population incremental selection through branch imbalance in lineage trees            Nucleic acids research   44        5          e46-e46            2016    Oxford University Press
    • “Slater, Noa; Mitchell, Rebecca Mans; Whitlock, Robert H; Fyock, Terry; Pradhan, Abani Kumar; Knupfer, Elena; Schukken, Ynte Hein; Louzoun, Yoram; ” Impact of the shedding level on transmission of persistent infections in Mycobacterium avium subspecies paratuberculosis (MAP)  Veterinary research      47        1            38        2016    BioMed Central
    • “Covacu, Ruxandra; Philip, Hagit; Jaronen, Merja; Almeida, Jorge; Kenison, Jessica E; Darko, Samuel; Chao, Chun-Cheih; Yaari, Gur; Louzoun, Yoram; Carmel, Liran; ” System-wide analysis of the T cell response            Cell reports       14        11        2733-2744       2016    Cell Press
    • “Tomer Illouz, Ravit Madar, Yoram Louzon, Kathleen J. Griffioen, Eitan Okun; ” Unraveling cognitive traits using the Morris water maze unbiased strategy classification (MUST-C) algorithm           “Brain, Behavior, and Immunity”        52                    132-144           2016    elsevier
    • “Illouz, Tomer; Madar, Ravit; Clague, Charlotte; Griffioen, Kathleen J; Louzoun, Yoram; Okun, Eitan; ” Unbiased classification of spatial strategies in the Barnes maze   Bioinformatics  32        21            3314-3320       2016    Oxford University Press
    • “Alter, Idan; Louzoun, Yoram; ” Population Growth Combined with Wide Offspring Distributions can Increase Fixation Rate and Reduce Genetic Diversity        Bulletin of Mathematical Biology           78        7            1477-1492       2016    Springer US
    • “Lachiany, Menachem; Louzoun, Yoram; ” Effects of distribution of infection rate on epidemic models            Physical Review E          94        2          22409  2016    American Physical Society
    • “Brot, Hilla; Muchnik, Lev; Goldenberg, Jacob; Louzoun, Yoram; ” Evolution through bursts: Network structure develops through localized bursts in time and space    Network Science           4          3          293-313      2016    Cambridge University Press
    • “Rosen, Yonatan; Kirsch, Lior; Louzoun, Yoram; ” Optimal network modification for spectral radius dependent phase transitions New Journal of Physics  18        9          93039  2016    IOP Publishing
    • “Perera, Jason; Zheng, Zhong; Li, Shuyin; Gudjonson, Herman; Kalinina, Olga; Benichou, Jennifer IC; Block, Katharine E; Louzoun, Yoram; Yin, Dengping; Chong, Anita S; ” Self-Antigen-Driven Thymic B Cell Class Switching Promotes T Cell Central Tolerance      Cell reports       17        2          387-398           2016    Cell Press
    • “Louzoun, Yoram; Benichou, Jennifer; Kleinstein, Steve; Yaari, Gur; ” THE MUTATION PATTERNS IN B CELL IG RECEPTORS REFLECT THE INFLUENCE OF SELECTION ACTING AT MULTIPLE TIME SCALES          HLA      87            4          275-275           2016    “WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA”
    • “Louzoun, Yoram; Slater, Noa; Albrecht, Mark; Gradget, Loren; Maiers, Martin; ” POWER LAWS FOR HEAVY-TAILED DISTRIBUTIONS: MODELING ALLELE AND HAPLOTYPE DIVERSITY FOR THE NATIONAL MARROW DONOR PROGRAM HLA      87        4          211-211           2016    “WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA”
    • “Louzoun, Yoram; Maman, Yaakov; ” EFFECT OF PROTEIN LENGTH AND NUMBER ON THE EVOLUTION OF ESCAPE MUTATIONS IN VIRUSES           HLA      87        4          218-218           2016    “WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA”
    • “Louzoun, Yoram; Maman, Yaakov; Hershberg, Uri; ” VIRAL CD8 T CELL EPITOPE NUCLEOTIDE COMPOSITION SHOWS EVIDENCE OF SHORT AND LONG TERM EVOLUTIONARY STRATEGIES        HLA      87            4          218-218           2016    “WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA”
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